Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. MHTC-1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
968631 bp
Thymine Count
969319 bp
Guanine Count
1978850 bp
Cytosine Count
1966842 bp
Genome Length
5892341 bp
Protein-coding Genes
5482 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acetyl-coa carboxylase carboxyltransferase subunit beta | EJI01_16795 | Not Available | Negative | 3481584 - 3482456 | 31732.6 |
| tryptophan synthase subunit alpha | EJI01_16800 | Not Available | Negative | 3482557 - 3483402 | 29674.0 |
| tryptophan synthase subunit beta | EJI01_16805 | Not Available | Negative | 3483458 - 3484735 | 45759.2 |
| phosphoribosylanthranilate isomerase | EJI01_16810 | Not Available | Negative | 3484784 - 3485470 | 23563.1 |
| trna pseudouridine(38-40) synthase trua | EJI01_16815 | Not Available | Negative | 3485467 - 3486279 | 29903.6 |
| hypothetical protein | EJI01_16820 | Not Available | Negative | 3486306 - 3489023 | 92122.3 |
| aspartate-semialdehyde dehydrogenase | EJI01_16825 | Not Available | Negative | 3489189 - 3490331 | 40352.9 |
| 3-isopropylmalate dehydrogenase | EJI01_16830 | Not Available | Negative | 3490423 - 3491511 | 39011.0 |
| 3-isopropylmalate dehydratase small subunit | EJI01_16835 | Not Available | Negative | 3491539 - 3492189 | 24416.2 |
| 3-isopropylmalate dehydratase large subunit | EJI01_16840 | Not Available | Negative | 3492204 - 3493625 | 50987.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
