Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. MHTC-1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
968631 bp
Thymine Count
969319 bp
Guanine Count
1978850 bp
Cytosine Count
1966842 bp
Genome Length
5892341 bp
Protein-coding Genes
5482 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ssra-binding protein smpb | EJI01_01635 | Not Available | Positive | 349388 - 349864 | 18143.0 |
| putative colanic acid biosynthesis acetyltransferase | EJI01_01640 | Not Available | Positive | 349878 - 350453 | 20864.2 |
| sigma-70 family rna polymerase sigma factor | EJI01_01645 | Not Available | Positive | 350505 - 351014 | 19086.1 |
| anti-sigma factor | EJI01_01650 | Not Available | Positive | 351032 - 351754 | 26193.2 |
| atp-binding protein | EJI01_01655 | Not Available | Positive | 351823 - 352212 | 13612.3 |
| hypothetical protein | EJI01_01660 | Not Available | Negative | 352216 - 352644 | 16297.1 |
| dmt family transporter | EJI01_01665 | Not Available | Negative | 352716 - 353654 | 32957.2 |
| translational gtpase typa | EJI01_01670 | Not Available | Negative | 353620 - 355452 | 67361.0 |
| trna pseudouridine(55) synthase trub | EJI01_01675 | Not Available | Negative | 355449 - 356393 | 33525.4 |
| 30s ribosome-binding factor rbfa | EJI01_01680 | Not Available | Negative | 356481 - 356852 | 13760.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
