Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. MHTC-1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
968631 bp
Thymine Count
969319 bp
Guanine Count
1978850 bp
Cytosine Count
1966842 bp
Genome Length
5892341 bp
Protein-coding Genes
5482 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gtpase era | EJI01_16745 | Not Available | Positive | 3472866 - 3473834 | 35878.1 |
| dna repair protein reco | EJI01_16750 | Not Available | Positive | 3473865 - 3474638 | 28161.0 |
| pyridoxine 5'-phosphate synthase | EJI01_16755 | Not Available | Positive | 3474635 - 3475378 | 27034.9 |
| holo-acp synthase | EJI01_16760 | Not Available | Positive | 3475464 - 3475859 | 14959.0 |
| beta-n-acetylhexosaminidase | EJI01_16765 | Not Available | Positive | 3475856 - 3476932 | 38721.7 |
| m48 family peptidase | EJI01_16770 | Not Available | Negative | 3476929 - 3477438 | 19693.9 |
| hsp70 family protein | EJI01_16775 | Not Available | Negative | 3477435 - 3478688 | 45102.8 |
| lysine--trna ligase | EJI01_16780 | Not Available | Negative | 3478685 - 3480223 | 57696.7 |
| peptidase s16 | EJI01_16785 | Not Available | Negative | 3480315 - 3480986 | 24670.1 |
| yggt family protein | EJI01_16790 | Not Available | Positive | 3481012 - 3481572 | 20339.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
