Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. MHTC-1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
968631 bp
Thymine Count
969319 bp
Guanine Count
1978850 bp
Cytosine Count
1966842 bp
Genome Length
5892341 bp
Protein-coding Genes
5482 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| beta-ketoacyl-[acyl-carrier-protein] synthase ii | EJI01_16695 | Not Available | Positive | 3462737 - 3463981 | 43669.9 |
| hypothetical protein | EJI01_16700 | Not Available | Positive | 3463995 - 3464480 | 17355.5 |
| rna polymerase sigma factor rpoe | EJI01_16705 | Not Available | Positive | 3464477 - 3465151 | 25176.0 |
| anti-sigma factor | EJI01_16710 | Not Available | Positive | 3465165 - 3465800 | 22392.2 |
| transcriptional regulator | EJI01_16715 | Not Available | Positive | 3465823 - 3466890 | 38693.3 |
| degq family serine endoprotease | EJI01_16720 | Not Available | Positive | 3466939 - 3468423 | 52838.6 |
| elongation factor 4 | EJI01_16725 | Not Available | Positive | 3468945 - 3470756 | 66189.1 |
| signal peptidase i | EJI01_16730 | Not Available | Positive | 3470762 - 3471733 | 36800.7 |
| duf4845 domain-containing protein | EJI01_16735 | Not Available | Positive | 3471763 - 3472122 | 13044.9 |
| ribonuclease iii | EJI01_16740 | Not Available | Positive | 3472168 - 3472869 | 25187.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
