Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. MHTC-1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
968631 bp
Thymine Count
969319 bp
Guanine Count
1978850 bp
Cytosine Count
1966842 bp
Genome Length
5892341 bp
Protein-coding Genes
5482 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | EJI01_16595 | Not Available | Negative | 3442191 - 3443537 | 48357.0 |
| hypothetical protein | EJI01_16600 | Not Available | Negative | 3443575 - 3444549 | 36027.9 |
| gdp-l-fucose synthase | EJI01_16605 | Not Available | Negative | 3444580 - 3445548 | 35556.6 |
| mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase | EJI01_16610 | Not Available | Negative | 3445604 - 3447040 | 51949.2 |
| sugar transferase | EJI01_16615 | Not Available | Negative | 3447037 - 3447759 | 27788.8 |
| rne/rng family ribonuclease | EJI01_16620 | Not Available | Negative | 3448319 - 3451327 | 109938.0 |
| rlua family pseudouridine synthase | EJI01_16625 | Not Available | Positive | 3451869 - 3452924 | 38026.0 |
| had family hydrolase | EJI01_16630 | Not Available | Positive | 3452921 - 3453589 | 24251.9 |
| rieske (2fe-2s) protein | EJI01_16635 | Not Available | Positive | 3453600 - 3453965 | 13288.8 |
| s49 family peptidase | EJI01_16640 | Not Available | Positive | 3453967 - 3454989 | 37109.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
