Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. MHTC-1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
968631 bp
Thymine Count
969319 bp
Guanine Count
1978850 bp
Cytosine Count
1966842 bp
Genome Length
5892341 bp
Protein-coding Genes
5482 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rhomboid family intramembrane serine protease | EJI01_16495 | Not Available | Negative | 3410520 - 3411986 | 55166.8 |
| udp-glucose/gdp-mannose dehydrogenase family protein | EJI01_16500 | Not Available | Negative | 3412002 - 3413375 | 49949.8 |
| sdr family oxidoreductase | EJI01_16505 | Not Available | Negative | 3413380 - 3414351 | 36523.9 |
| glycosyltransferase family 2 protein | EJI01_16510 | Not Available | Negative | 3414378 - 3415229 | 32786.1 |
| argininosuccinate lyase | EJI01_16515 | Not Available | Negative | 3415378 - 3416775 | 51191.5 |
| sensor histidine kinase | EJI01_16520 | Not Available | Positive | 3416802 - 3417896 | 39030.1 |
| response regulator transcription factor | EJI01_16525 | Not Available | Positive | 3417901 - 3418650 | 27744.3 |
| ai-2e family transporter | EJI01_16530 | Not Available | Positive | 3418647 - 3419873 | 43677.8 |
| hypothetical protein | EJI01_16535 | Not Available | Negative | 3420000 - 3428174 | 298866.0 |
| hypothetical protein | EJI01_16540 | Not Available | Negative | 3428171 - 3428389 | 7770.51 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
