Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. MHTC-1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
968631 bp
Thymine Count
969319 bp
Guanine Count
1978850 bp
Cytosine Count
1966842 bp
Genome Length
5892341 bp
Protein-coding Genes
5482 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter substrate-binding protein | EJI01_16445 | Not Available | Negative | 3394656 - 3395600 | 32618.6 |
| hybrid sensor histidine kinase/response regulator | EJI01_16450 | Not Available | Negative | 3395932 - 3397824 | 68571.8 |
| phosphate/phosphite/phosphonate abc transporter substrate-binding protein | EJI01_16455 | Not Available | Positive | 3398061 - 3399092 | 37265.8 |
| phosphate/phosphite/phosphonate abc transporter substrate-binding protein | EJI01_16460 | Not Available | Positive | 3399052 - 3400125 | 39506.4 |
| filamentous hemagglutinin | EJI01_16465 | Not Available | Positive | 3400173 - 3406348 | 206992.0 |
| hypothetical protein | EJI01_16470 | Not Available | Positive | 3406375 - 3406710 | 11858.4 |
| hypothetical protein | EJI01_16475 | Not Available | Positive | 3406707 - 3407396 | 25046.5 |
| hypothetical protein | EJI01_16480 | Not Available | Positive | 3407543 - 3408163 | 22790.2 |
| gdsl family lipase | EJI01_16485 | Not Available | Negative | 3408193 - 3408942 | 27287.9 |
| hypothetical protein | EJI01_16490 | Not Available | Positive | 3409117 - 3410415 | 47904.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
