Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. MHTC-1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
968631 bp
Thymine Count
969319 bp
Guanine Count
1978850 bp
Cytosine Count
1966842 bp
Genome Length
5892341 bp
Protein-coding Genes
5482 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| shlb/fhac/hecb family hemolysin secretion/activation protein | EJI01_16395 | Not Available | Positive | 3381747 - 3383420 | 59741.5 |
| filamentous hemagglutinin n-terminal domain-containing protein | EJI01_16400 | Not Available | Positive | 3383422 - 3387150 | 122437.0 |
| gfa family protein | EJI01_16405 | Not Available | Positive | 3387251 - 3387634 | 14258.1 |
| hypothetical protein | EJI01_16410 | Not Available | Positive | 3388011 - 3388883 | 31056.0 |
| gnat family n-acetyltransferase | EJI01_16415 | Not Available | Negative | 3389168 - 3389650 | 18231.7 |
| hypothetical protein | EJI01_16420 | Not Available | Positive | 3390009 - 3390545 | 19280.1 |
| voc family protein | EJI01_16425 | Not Available | Negative | 3390600 - 3390974 | 13418.8 |
| hypothetical protein | EJI01_16430 | Not Available | Negative | 3391187 - 3391432 | 8591.57 |
| hypothetical protein | EJI01_16435 | Not Available | Negative | 3391866 - 3392645 | 28579.9 |
| response regulator | EJI01_16440 | Not Available | Negative | 3392674 - 3394659 | 70469.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
