Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. MHTC-1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
968631 bp
Thymine Count
969319 bp
Guanine Count
1978850 bp
Cytosine Count
1966842 bp
Genome Length
5892341 bp
Protein-coding Genes
5482 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| thiamine pyrophosphate-dependent dehydrogenase e1 component subunit alpha | EJI01_16340 | Not Available | Negative | 3367293 - 3368312 | 34929.4 |
| fis family transcriptional regulator | EJI01_16345 | Not Available | Negative | 3368410 - 3369597 | 42892.4 |
| pqq-dependent dehydrogenase, methanol/ethanol family | EJI01_16350 | Not Available | Positive | 3369727 - 3371835 | 76099.0 |
| d-xylose abc transporter substrate-binding protein | EJI01_16360 | Not Available | Positive | 3372234 - 3373265 | 36260.8 |
| abc transporter permease | EJI01_16365 | Not Available | Positive | 3373384 - 3374553 | 41025.6 |
| sugar abc transporter atp-binding protein | EJI01_16370 | Not Available | Positive | 3374553 - 3375329 | 28000.0 |
| tripartite tricarboxylate transporter substrate binding protein bugd | EJI01_16375 | Not Available | Negative | 3375893 - 3376867 | 34157.6 |
| nad-dependent succinate-semialdehyde dehydrogenase | EJI01_16380 | Not Available | Positive | 3377028 - 3378488 | 51275.7 |
| 2-dehydropantoate 2-reductase | EJI01_16385 | Not Available | Negative | 3378492 - 3379418 | 32905.7 |
| chat domain-containing protein | EJI01_16390 | Not Available | Positive | 3379618 - 3381750 | 76713.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
