Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. MHTC-1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
968631 bp
Thymine Count
969319 bp
Guanine Count
1978850 bp
Cytosine Count
1966842 bp
Genome Length
5892341 bp
Protein-coding Genes
5482 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| enoyl-coa hydratase family protein | EJI01_16290 | Not Available | Negative | 3357277 - 3358131 | 30486.7 |
| marr family transcriptional regulator | EJI01_16295 | Not Available | Negative | 3358128 - 3358604 | 18235.0 |
| bifunctional salicylyl-coa 5-hydroxylase/oxidoreductase | EJI01_16300 | Not Available | Negative | 3358772 - 3361120 | 86650.9 |
| class i sam-dependent methyltransferase | EJI01_16305 | Not Available | Positive | 3361234 - 3362502 | 47151.5 |
| duf1840 domain-containing protein | EJI01_16310 | Not Available | Positive | 3362517 - 3362840 | 12166.7 |
| tripartite tricarboxylate transporter substrate binding protein | EJI01_16315 | Not Available | Negative | 3362982 - 3363998 | 35079.4 |
| lysr family transcriptional regulator | EJI01_16320 | Not Available | Negative | 3364076 - 3364999 | 32463.6 |
| sdr family oxidoreductase | EJI01_16325 | Not Available | Positive | 3365109 - 3365870 | 25425.2 |
| marr family transcriptional regulator | EJI01_16330 | Not Available | Negative | 3365798 - 3366313 | 19146.2 |
| alpha-ketoacid dehydrogenase subunit beta | EJI01_16335 | Not Available | Negative | 3366310 - 3367296 | 34675.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
