Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. MHTC-1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
968631 bp
Thymine Count
969319 bp
Guanine Count
1978850 bp
Cytosine Count
1966842 bp
Genome Length
5892341 bp
Protein-coding Genes
5482 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| response regulator transcription factor | EJI01_01585 | Not Available | Positive | 336418 - 336957 | 19728.7 |
| eal domain-containing protein | EJI01_01590 | Not Available | Positive | 337076 - 337822 | 27108.6 |
| pilus assembly protein pilb | EJI01_01595 | Not Available | Negative | 337827 - 339716 | 69400.1 |
| diguanylate cyclase | EJI01_01600 | Not Available | Negative | 339722 - 342862 | 115083.0 |
| hypothetical protein | EJI01_01605 | Not Available | Negative | 343079 - 344305 | 42106.5 |
| glutamine-hydrolyzing gmp synthase | EJI01_01610 | Not Available | Negative | 344652 - 346265 | 58852.9 |
| imp dehydrogenase | EJI01_01615 | Not Available | Negative | 346277 - 347746 | 51568.4 |
| duf4124 domain-containing protein | EJI01_01620 | Not Available | Positive | 347896 - 348420 | 18564.9 |
| rnfh family protein | EJI01_01625 | Not Available | Negative | 348547 - 348879 | 12268.8 |
| type ii toxin-antitoxin system rata family toxin | EJI01_01630 | Not Available | Negative | 348879 - 349325 | 16589.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
