Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. MHTC-1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
968631 bp
Thymine Count
969319 bp
Guanine Count
1978850 bp
Cytosine Count
1966842 bp
Genome Length
5892341 bp
Protein-coding Genes
5482 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 30s ribosomal protein s14 | EJI01_16190 | Not Available | Positive | 3345509 - 3345814 | 11339.8 |
| 30s ribosomal protein s8 | EJI01_16195 | Not Available | Positive | 3345835 - 3346230 | 14032.3 |
| 50s ribosomal protein l6 | EJI01_16200 | Not Available | Positive | 3346255 - 3346788 | 18907.1 |
| 50s ribosomal protein l18 | EJI01_16205 | Not Available | Positive | 3346803 - 3347168 | 12779.4 |
| 30s ribosomal protein s5 | EJI01_16210 | Not Available | Positive | 3347187 - 3347705 | 17965.1 |
| 50s ribosomal protein l30 | EJI01_16215 | Not Available | Positive | 3347720 - 3347905 | 6762.44 |
| 50s ribosomal protein l15 | EJI01_16220 | Not Available | Positive | 3347930 - 3348361 | 14651.1 |
| preprotein translocase subunit secy | EJI01_16225 | Not Available | Positive | 3348382 - 3349692 | 47600.5 |
| translation initiation factor if-1 | EJI01_16230 | Not Available | Positive | 3349702 - 3349920 | 8263.2 |
| 50s ribosomal protein l36 | EJI01_16235 | Not Available | Positive | 3349955 - 3350068 | 4294.47 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
