Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. MHTC-1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
968631 bp
Thymine Count
969319 bp
Guanine Count
1978850 bp
Cytosine Count
1966842 bp
Genome Length
5892341 bp
Protein-coding Genes
5482 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trna preq1(34) s-adenosylmethionine ribosyltransferase-isomerase quea | EJI01_16140 | Not Available | Negative | 3334673 - 3335716 | 38235.8 |
| atp-dependent dna helicase recg | EJI01_16145 | Not Available | Positive | 3335793 - 3337907 | 76755.8 |
| lysr family transcriptional regulator | EJI01_16150 | Not Available | Positive | 3338048 - 3339013 | 35427.1 |
| dna starvation/stationary phase protection protein | EJI01_16155 | Not Available | Positive | 3339149 - 3339742 | 21603.9 |
| tonb-dependent siderophore receptor | EJI01_16160 | Not Available | Negative | 3339753 - 3341906 | 78117.3 |
| 4-hydroxybenzoate octaprenyltransferase | EJI01_16165 | Not Available | Positive | 3342135 - 3343016 | 31731.0 |
| pyrroline-5-carboxylate reductase | EJI01_16170 | Not Available | Negative | 3343030 - 3343887 | 29476.4 |
| 50s ribosomal protein l14 | EJI01_16175 | Not Available | Positive | 3344251 - 3344619 | 13183.3 |
| 50s ribosomal protein l24 | EJI01_16180 | Not Available | Positive | 3344632 - 3344949 | 11317.9 |
| 50s ribosomal protein l5 | EJI01_16185 | Not Available | Positive | 3344961 - 3345500 | 20070.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
