Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. MHTC-1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
968631 bp
Thymine Count
969319 bp
Guanine Count
1978850 bp
Cytosine Count
1966842 bp
Genome Length
5892341 bp
Protein-coding Genes
5482 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mfs transporter | EJI01_16090 | Not Available | Positive | 3324291 - 3326252 | 70962.9 |
| phosphatase pap2 family protein | EJI01_16095 | Not Available | Positive | 3326252 - 3326905 | 23832.3 |
| hypothetical protein | EJI01_16100 | Not Available | Positive | 3327009 - 3327494 | 17787.6 |
| hypothetical protein | EJI01_16105 | Not Available | Positive | 3327529 - 3327987 | 14622.9 |
| duf2145 domain-containing protein | EJI01_16110 | Not Available | Positive | 3328056 - 3328868 | 29463.5 |
| fad-binding oxidoreductase | EJI01_16115 | Not Available | Positive | 3328922 - 3330298 | 51712.0 |
| serine endopeptidase | EJI01_16120 | Not Available | Positive | 3330319 - 3331404 | 40354.6 |
| sdr family oxidoreductase | EJI01_16125 | Not Available | Negative | 3331377 - 3332153 | 27441.6 |
| aldose 1-epimerase | EJI01_16130 | Not Available | Positive | 3332273 - 3333190 | 33140.1 |
| trna guanosine(34) transglycosylase tgt | EJI01_16135 | Not Available | Negative | 3333507 - 3334679 | 43279.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
