Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. MHTC-1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
968631 bp
Thymine Count
969319 bp
Guanine Count
1978850 bp
Cytosine Count
1966842 bp
Genome Length
5892341 bp
Protein-coding Genes
5482 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | EJI01_16035 | Not Available | Positive | 3312546 - 3312899 | 11807.7 |
| tonb-dependent receptor | EJI01_16040 | Not Available | Positive | 3313003 - 3315318 | 83777.6 |
| copper chaperone pcu(a)c | EJI01_16045 | Not Available | Positive | 3315347 - 3315838 | 16679.4 |
| hypothetical protein | EJI01_16050 | Not Available | Positive | 3315923 - 3316687 | 26361.1 |
| hypothetical protein | EJI01_16055 | Not Available | Positive | 3316723 - 3317991 | 44120.5 |
| amidohydrolase | EJI01_16060 | Not Available | Negative | 3318002 - 3319183 | 41778.1 |
| d-amino acid dehydrogenase | EJI01_16070 | Not Available | Negative | 3319408 - 3320676 | 46131.0 |
| fad-dependent oxidoreductase | EJI01_16075 | Not Available | Negative | 3320998 - 3322278 | 46459.2 |
| xre family transcriptional regulator | EJI01_16080 | Not Available | Negative | 3322572 - 3323306 | 27999.3 |
| hypothetical protein | EJI01_16085 | Not Available | Positive | 3323427 - 3324269 | 29716.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
