Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. MHTC-1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
968631 bp
Thymine Count
969319 bp
Guanine Count
1978850 bp
Cytosine Count
1966842 bp
Genome Length
5892341 bp
Protein-coding Genes
5482 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf3108 domain-containing protein | EJI01_15980 | Not Available | Negative | 3301982 - 3303097 | 38856.5 |
| faa hydrolase family protein | EJI01_15985 | Not Available | Positive | 3303197 - 3304219 | 36752.6 |
| luxr family transcriptional regulator | EJI01_15995 | Not Available | Negative | 3304467 - 3305255 | 28477.6 |
| fad-dependent oxidoreductase | EJI01_16000 | Not Available | Positive | 3305330 - 3307087 | 63023.8 |
| hypothetical protein | EJI01_16005 | Not Available | Positive | 3307146 - 3307376 | 8148.77 |
| tripartite tricarboxylate transporter substrate binding protein | EJI01_16010 | Not Available | Positive | 3307418 - 3308392 | 34402.9 |
| hypothetical protein | EJI01_16015 | Not Available | Negative | 3308636 - 3309790 | 42819.3 |
| dioxygenase | EJI01_16020 | Not Available | Negative | 3309814 - 3310227 | 15527.5 |
| cystathionine gamma-synthase family protein | EJI01_16025 | Not Available | Positive | 3310280 - 3311530 | 43836.7 |
| trab/gumn family protein | EJI01_16030 | Not Available | Positive | 3311527 - 3312516 | 35074.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
