Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. MHTC-1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
968631 bp
Thymine Count
969319 bp
Guanine Count
1978850 bp
Cytosine Count
1966842 bp
Genome Length
5892341 bp
Protein-coding Genes
5482 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sgnh/gdsl hydrolase family protein | EJI01_15930 | Not Available | Positive | 3292806 - 3294083 | 45027.0 |
| hypothetical protein | EJI01_15935 | Not Available | Positive | 3294182 - 3294637 | 17531.5 |
| lrgb family protein | EJI01_15940 | Not Available | Negative | 3294688 - 3295413 | 24810.8 |
| cida/lrga family protein | EJI01_15945 | Not Available | Negative | 3295417 - 3295767 | 12449.0 |
| fad-binding protein | EJI01_15950 | Not Available | Negative | 3295781 - 3297259 | 52432.0 |
| formyltetrahydrofolate deformylase | EJI01_15955 | Not Available | Negative | 3297269 - 3298114 | 31308.5 |
| aminotransferase class iii-fold pyridoxal phosphate-dependent enzyme | EJI01_15960 | Not Available | Positive | 3298239 - 3299573 | 48372.2 |
| hypothetical protein | EJI01_15965 | Not Available | Negative | 3299631 - 3300455 | 29101.4 |
| abrb family transcriptional regulator | EJI01_15970 | Not Available | Positive | 3300467 - 3301585 | 39478.8 |
| duf3567 domain-containing protein | EJI01_15975 | Not Available | Negative | 3301582 - 3301893 | 11433.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
