Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. MHTC-1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
968631 bp
Thymine Count
969319 bp
Guanine Count
1978850 bp
Cytosine Count
1966842 bp
Genome Length
5892341 bp
Protein-coding Genes
5482 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sis domain-containing protein | EJI01_15780 | Not Available | Positive | 3258467 - 3259093 | 21256.3 |
| bon domain-containing protein | EJI01_15785 | Not Available | Positive | 3259090 - 3259827 | 25543.7 |
| nad(p)-dependent oxidoreductase | EJI01_15790 | Not Available | Negative | 3259831 - 3260751 | 31842.1 |
| pilt/pilu family type 4a pilus atpase | EJI01_15795 | Not Available | Negative | 3260888 - 3262024 | 41933.7 |
| type iv pilus twitching motility protein pilt | EJI01_15800 | Not Available | Negative | 3262197 - 3263240 | 38144.2 |
| yggs family pyridoxal phosphate-dependent enzyme | EJI01_15805 | Not Available | Positive | 3263280 - 3263966 | 24590.8 |
| winged helix-turn-helix transcriptional regulator | EJI01_15810 | Not Available | Negative | 3263963 - 3264442 | 17944.8 |
| l-glutamate gamma-semialdehyde dehydrogenase | EJI01_15815 | Not Available | Positive | 3264535 - 3267579 | 108046.0 |
| glu/leu/phe/val dehydrogenase | EJI01_15820 | Not Available | Positive | 3267665 - 3268936 | 45736.1 |
| nucleoside/nucleotide kinase family protein | EJI01_15825 | Not Available | Positive | 3268933 - 3269550 | 22597.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
