Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. MHTC-1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
968631 bp
Thymine Count
969319 bp
Guanine Count
1978850 bp
Cytosine Count
1966842 bp
Genome Length
5892341 bp
Protein-coding Genes
5482 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alpha/beta fold hydrolase | EJI01_01535 | Not Available | Positive | 326455 - 327561 | 40926.6 |
| tetratricopeptide repeat protein | EJI01_01540 | Not Available | Positive | 327628 - 328107 | 17436.8 |
| 2'-5' rna ligase | EJI01_01545 | Not Available | Negative | 328131 - 328721 | 21576.2 |
| mfs transporter | EJI01_01550 | Not Available | Negative | 328718 - 330061 | 47826.2 |
| ubiquinol oxidase subunit ii | EJI01_01555 | Not Available | Positive | 330234 - 331289 | 38376.1 |
| cytochrome o ubiquinol oxidase subunit i | EJI01_01560 | Not Available | Positive | 331297 - 333306 | 74978.1 |
| cytochrome o ubiquinol oxidase subunit iii | EJI01_01565 | Not Available | Positive | 333299 - 333937 | 23449.0 |
| cytochrome o ubiquinol oxidase subunit iv | EJI01_01570 | Not Available | Positive | 333996 - 334376 | 13913.2 |
| surf1 family protein | EJI01_01575 | Not Available | Positive | 334373 - 335146 | 28067.6 |
| hamp domain-containing histidine kinase | EJI01_01580 | Not Available | Positive | 335130 - 336428 | 46323.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
