Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. MHTC-1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
968631 bp
Thymine Count
969319 bp
Guanine Count
1978850 bp
Cytosine Count
1966842 bp
Genome Length
5892341 bp
Protein-coding Genes
5482 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| relaxase | EJI01_15670 | Not Available | Positive | 3234159 - 3235265 | 41275.9 |
| alpa family phage regulatory protein | EJI01_15675 | Not Available | Negative | 3236145 - 3236414 | 10071.1 |
| is3 family transposase | EJI01_15680 | Not Available | Negative | 3236933 - 3238068 | 43235.7 |
| hypothetical protein | EJI01_15685 | Not Available | Positive | 3238399 - 3239481 | 40687.2 |
| hypothetical protein | EJI01_15690 | Not Available | Positive | 3239465 - 3240172 | 26094.2 |
| hypothetical protein | EJI01_15705 | Not Available | Positive | 3241030 - 3242283 | 46512.2 |
| dna-processing protein dpra | EJI01_15710 | Not Available | Positive | 3242704 - 3244143 | 51814.2 |
| hypothetical protein | EJI01_15715 | Not Available | Negative | 3245078 - 3246193 | 41379.9 |
| hypothetical protein | EJI01_15720 | Not Available | Positive | 3247061 - 3247318 | 8839.47 |
| sagb/thcox family dehydrogenase | EJI01_15725 | Not Available | Positive | 3247490 - 3248137 | 23096.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
