Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. MHTC-1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
968631 bp
Thymine Count
969319 bp
Guanine Count
1978850 bp
Cytosine Count
1966842 bp
Genome Length
5892341 bp
Protein-coding Genes
5482 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | EJI01_15620 | Not Available | Positive | 3225467 - 3226690 | 44501.2 |
| hypothetical protein | EJI01_15625 | Not Available | Negative | 3226979 - 3227716 | 28184.6 |
| dna (cytosine-5-)-methyltransferase | EJI01_15630 | Not Available | Negative | 3227719 - 3228846 | 41245.0 |
| dna mismatch endonuclease vsr | EJI01_15635 | Not Available | Negative | 3228996 - 3229409 | 15920.4 |
| duf4102 domain-containing protein | EJI01_15640 | Not Available | Negative | 3229556 - 3229756 | 7006.43 |
| hypothetical protein | EJI01_15645 | Not Available | Positive | 3229989 - 3230408 | 16205.1 |
| hypothetical protein | EJI01_15650 | Not Available | Positive | 3230421 - 3231269 | 31545.8 |
| xre family transcriptional regulator | EJI01_15655 | Not Available | Negative | 3232020 - 3232292 | 9983.1 |
| xre family transcriptional regulator | EJI01_15660 | Not Available | Positive | 3232548 - 3233120 | 20563.8 |
| hypothetical protein | EJI01_15665 | Not Available | Positive | 3233612 - 3234166 | 19966.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
