Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. MHTC-1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
968631 bp
Thymine Count
969319 bp
Guanine Count
1978850 bp
Cytosine Count
1966842 bp
Genome Length
5892341 bp
Protein-coding Genes
5482 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| efflux rnd transporter periplasmic adaptor subunit | EJI01_15570 | Not Available | Negative | 3206791 - 3208068 | 43650.3 |
| tetr family transcriptional regulator | EJI01_15575 | Not Available | Positive | 3208212 - 3208871 | 24094.0 |
| Trna-arg | Not Available | Not Available | Positive | 3208913 - 3208987 | Not Available |
| duf4102 domain-containing protein | EJI01_15585 | Not Available | Positive | 3209164 - 3210366 | 45024.4 |
| hypothetical protein | EJI01_15590 | Not Available | Positive | 3211344 - 3211658 | 11523.0 |
| hypothetical protein | EJI01_15595 | Not Available | Positive | 3211655 - 3214504 | 106263.0 |
| hypothetical protein | EJI01_15600 | Not Available | Positive | 3214501 - 3215613 | 40855.2 |
| duf1998 domain-containing protein | EJI01_15605 | Not Available | Positive | 3215610 - 3221189 | 204098.0 |
| duf4338 domain-containing protein | EJI01_15610 | Not Available | Negative | 3221201 - 3222409 | 44783.8 |
| protein kinase family protein | EJI01_15615 | Not Available | Positive | 3222861 - 3225470 | 98369.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
