Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. MHTC-1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
968631 bp
Thymine Count
969319 bp
Guanine Count
1978850 bp
Cytosine Count
1966842 bp
Genome Length
5892341 bp
Protein-coding Genes
5482 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tpm domain-containing protein | EJI01_15520 | Not Available | Negative | 3196418 - 3196945 | 19385.3 |
| ygcg family protein | EJI01_15525 | Not Available | Negative | 3196948 - 3197883 | 31244.7 |
| lema family protein | EJI01_15530 | Not Available | Negative | 3197892 - 3198488 | 22249.4 |
| hypothetical protein | EJI01_15535 | Not Available | Positive | 3198534 - 3199289 | 27235.1 |
| duf4440 domain-containing protein | EJI01_15540 | Not Available | Positive | 3199351 - 3199803 | 16226.2 |
| alpha/beta hydrolase | EJI01_15545 | Not Available | Positive | 3199805 - 3200863 | 37818.0 |
| duf2946 family protein | EJI01_15550 | Not Available | Positive | 3200904 - 3201449 | 20350.1 |
| cytochrome c5 family protein | EJI01_15555 | Not Available | Negative | 3201499 - 3202101 | 20654.5 |
| efflux transporter outer membrane subunit | EJI01_15560 | Not Available | Negative | 3202193 - 3203620 | 50461.0 |
| efflux rnd transporter permease subunit | EJI01_15565 | Not Available | Negative | 3203613 - 3206777 | 112377.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
