Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. MHTC-1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
968631 bp
Thymine Count
969319 bp
Guanine Count
1978850 bp
Cytosine Count
1966842 bp
Genome Length
5892341 bp
Protein-coding Genes
5482 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | EJI01_15470 | Not Available | Positive | 3185707 - 3186249 | 20500.2 |
| hypothetical protein | EJI01_15475 | Not Available | Positive | 3186246 - 3186677 | 16298.8 |
| nad(+) synthase | EJI01_15480 | Not Available | Positive | 3186771 - 3188855 | 76383.7 |
| duf3606 domain-containing protein | EJI01_15485 | Not Available | Negative | 3188863 - 3189081 | 7934.22 |
| duf3617 family protein | EJI01_15490 | Not Available | Positive | 3189283 - 3189810 | 18554.6 |
| ligase-associated dna damage response exonuclease | EJI01_15495 | Not Available | Positive | 3189881 - 3190945 | 38173.2 |
| atp-dependent dna ligase | EJI01_15500 | Not Available | Positive | 3190942 - 3192591 | 61470.1 |
| ligase-associated dna damage response dexh box helicase | EJI01_15505 | Not Available | Positive | 3192588 - 3195101 | 92037.1 |
| ligase-associated dna damage response endonuclease pdem | EJI01_15510 | Not Available | Positive | 3195153 - 3195839 | 24963.8 |
| cyclic nucleotide-binding domain-containing protein | EJI01_15515 | Not Available | Positive | 3195836 - 3196414 | 20526.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
