Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. MHTC-1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
968631 bp
Thymine Count
969319 bp
Guanine Count
1978850 bp
Cytosine Count
1966842 bp
Genome Length
5892341 bp
Protein-coding Genes
5482 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| f0f1 atp synthase subunit alpha | EJI01_15420 | Not Available | Positive | 3173982 - 3175535 | 55334.5 |
| f0f1 atp synthase subunit gamma | EJI01_15425 | Not Available | Positive | 3175554 - 3176429 | 31656.5 |
| f0f1 atp synthase subunit beta | EJI01_15430 | Not Available | Positive | 3176482 - 3177897 | 50720.8 |
| f0f1 atp synthase subunit epsilon | EJI01_15435 | Not Available | Positive | 3177916 - 3178335 | 14747.6 |
| alpha/beta hydrolase | EJI01_15440 | Not Available | Negative | 3178390 - 3179163 | 26860.0 |
| rok family protein | EJI01_15445 | Not Available | Positive | 3179406 - 3180575 | 40709.5 |
| sugar abc transporter atp-binding protein | EJI01_15450 | Not Available | Positive | 3180572 - 3182089 | 54957.6 |
| abc transporter permease | EJI01_15455 | Not Available | Positive | 3182058 - 3183092 | 35528.5 |
| abc transporter substrate-binding protein | EJI01_15460 | Not Available | Positive | 3183221 - 3184183 | 34844.9 |
| gfo/idh/moca family oxidoreductase | EJI01_15465 | Not Available | Positive | 3184314 - 3185480 | 41977.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
