Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. MHTC-1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
968631 bp
Thymine Count
969319 bp
Guanine Count
1978850 bp
Cytosine Count
1966842 bp
Genome Length
5892341 bp
Protein-coding Genes
5482 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 3-carboxy-cis,cis-muconate cycloisomerase | EJI01_15320 | Not Available | Positive | 3154688 - 3156064 | 49447.9 |
| tripartite tricarboxylate transporter substrate binding protein bugd | EJI01_15325 | Not Available | Positive | 3156109 - 3157086 | 34229.5 |
| class ii fumarate hydratase | EJI01_15330 | Not Available | Positive | 3157092 - 3158492 | 49739.2 |
| duf1646 domain-containing protein | EJI01_15335 | Not Available | Negative | 3158482 - 3159603 | 39724.4 |
| 4-coumarate--coa ligase | EJI01_15340 | Not Available | Negative | 3159581 - 3161107 | 54614.2 |
| pilus assembly protein pily | EJI01_15345 | Not Available | Negative | 3161260 - 3164571 | 116093.0 |
| pilus assembly protein | EJI01_15350 | Not Available | Negative | 3164591 - 3165142 | 18603.1 |
| pilus assembly protein pilw | EJI01_15355 | Not Available | Negative | 3165139 - 3166197 | 37214.7 |
| type iv pilus modification protein pilv | EJI01_15360 | Not Available | Negative | 3166206 - 3166778 | 19528.5 |
| prepilin-type n-terminal cleavage/methylation domain-containing protein | EJI01_15365 | Not Available | Negative | 3166803 - 3167285 | 17228.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
