Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. MHTC-1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
968631 bp
Thymine Count
969319 bp
Guanine Count
1978850 bp
Cytosine Count
1966842 bp
Genome Length
5892341 bp
Protein-coding Genes
5482 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| branched-chain amino acid abc transporter substrate-binding protein | EJI01_15270 | Not Available | Positive | 3145157 - 3146347 | 43352.5 |
| branched-chain amino acid abc transporter permease | EJI01_15275 | Not Available | Positive | 3146349 - 3147224 | 31052.4 |
| branched-chain amino acid abc transporter permease | EJI01_15280 | Not Available | Positive | 3147221 - 3148135 | 31873.9 |
| abc transporter atp-binding protein | EJI01_15285 | Not Available | Positive | 3148128 - 3148883 | 26781.6 |
| abc transporter atp-binding protein | EJI01_15290 | Not Available | Positive | 3148880 - 3149590 | 24988.9 |
| aldehyde dehydrogenase | EJI01_15295 | Not Available | Positive | 3149619 - 3151073 | 50091.1 |
| nadp-dependent oxidoreductase | EJI01_15300 | Not Available | Positive | 3151183 - 3152223 | 37004.7 |
| eama/rhat family transporter | EJI01_15305 | Not Available | Negative | 3152229 - 3153074 | 29486.9 |
| arac family transcriptional regulator | EJI01_15310 | Not Available | Negative | 3153138 - 3153836 | 25175.1 |
| gntr family transcriptional regulator | EJI01_15315 | Not Available | Negative | 3153863 - 3154594 | 26902.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
