Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. MHTC-1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
968631 bp
Thymine Count
969319 bp
Guanine Count
1978850 bp
Cytosine Count
1966842 bp
Genome Length
5892341 bp
Protein-coding Genes
5482 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | EJI01_15220 | Not Available | Positive | 3136710 - 3137240 | 18414.2 |
| mfs transporter | EJI01_15225 | Not Available | Positive | 3137237 - 3138499 | 45107.2 |
| pts fructose transporter subunit iia | EJI01_15230 | Not Available | Positive | 3138496 - 3138951 | 16277.8 |
| hpr family phosphocarrier protein | EJI01_15235 | Not Available | Positive | 3138920 - 3139189 | 9569.7 |
| phosphoenolpyruvate--protein phosphotransferase | EJI01_15240 | Not Available | Positive | 3139186 - 3140994 | 66224.0 |
| periplasmic heavy metal sensor | EJI01_15245 | Not Available | Positive | 3141098 - 3141562 | 16928.2 |
| duf4260 family protein | EJI01_15250 | Not Available | Positive | 3141555 - 3142016 | 15686.2 |
| response regulator transcription factor | EJI01_15255 | Not Available | Positive | 3142084 - 3142770 | 25588.1 |
| hamp domain-containing protein | EJI01_15260 | Not Available | Positive | 3142860 - 3144062 | 43872.2 |
| helix-turn-helix domain-containing protein | EJI01_15265 | Not Available | Negative | 3144037 - 3144993 | 35239.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
