Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. MHTC-1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
968631 bp
Thymine Count
969319 bp
Guanine Count
1978850 bp
Cytosine Count
1966842 bp
Genome Length
5892341 bp
Protein-coding Genes
5482 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 30s ribosomal protein s3 | EJI01_15170 | Not Available | Positive | 3131027 - 3131953 | 33593.4 |
| 50s ribosomal protein l16 | EJI01_15175 | Not Available | Positive | 3131982 - 3132398 | 15463.9 |
| 50s ribosomal protein l29 | EJI01_15180 | Not Available | Positive | 3132459 - 3132671 | 7907.59 |
| 30s ribosomal protein s17 | EJI01_15185 | Not Available | Positive | 3132681 - 3132950 | 10206.5 |
| peroxiredoxin | EJI01_15190 | Not Available | Positive | 3133031 - 3133537 | 17557.9 |
| gnat family n-acetyltransferase | EJI01_15195 | Not Available | Negative | 3133541 - 3134122 | 20925.0 |
| cytochrome b | EJI01_15200 | Not Available | Negative | 3134119 - 3134832 | 25600.2 |
| cytochrome c | EJI01_15205 | Not Available | Positive | 3134985 - 3135425 | 15276.3 |
| tlpa family protein disulfide reductase | EJI01_15210 | Not Available | Negative | 3135453 - 3135950 | 17842.7 |
| duf4197 domain-containing protein | EJI01_15215 | Not Available | Positive | 3135964 - 3136668 | 24762.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
