Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. MHTC-1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
968631 bp
Thymine Count
969319 bp
Guanine Count
1978850 bp
Cytosine Count
1966842 bp
Genome Length
5892341 bp
Protein-coding Genes
5482 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | EJI01_14910 | Not Available | Negative | 3086572 - 3086883 | 11585.3 |
| hsp20/alpha crystallin family protein | EJI01_14915 | Not Available | Negative | 3086950 - 3087348 | 14243.0 |
| hsp20/alpha crystallin family protein | EJI01_14920 | Not Available | Negative | 3087345 - 3087782 | 16192.3 |
| aldo/keto reductase | EJI01_14925 | Not Available | Negative | 3088166 - 3089131 | 34284.6 |
| chromate transporter | EJI01_14930 | Not Available | Negative | 3089153 - 3089752 | 21217.3 |
| chromate transporter | EJI01_14940 | Not Available | Negative | 3090001 - 3090588 | 20535.7 |
| yihy/virulence factor brkb family protein | EJI01_14945 | Not Available | Positive | 3090666 - 3091556 | 31835.4 |
| duf924 domain-containing protein | EJI01_14950 | Not Available | Negative | 3091573 - 3092118 | 20069.4 |
| chrd domain-containing protein | EJI01_14955 | Not Available | Positive | 3092224 - 3092673 | 15173.3 |
| patatin-like phospholipase family protein | EJI01_14960 | Not Available | Positive | 3092718 - 3093935 | 44223.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
