Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. MHTC-1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
968631 bp
Thymine Count
969319 bp
Guanine Count
1978850 bp
Cytosine Count
1966842 bp
Genome Length
5892341 bp
Protein-coding Genes
5482 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| flavodoxin-dependent (e)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase | EJI01_14805 | Not Available | Positive | 3068061 - 3069353 | 46378.7 |
| histidine--trna ligase | EJI01_14810 | Not Available | Positive | 3069366 - 3070676 | 47852.1 |
| tetratricopeptide repeat protein | EJI01_14815 | Not Available | Positive | 3070683 - 3071375 | 25241.8 |
| outer membrane protein assembly factor bamb | EJI01_14820 | Not Available | Positive | 3071372 - 3072514 | 39714.3 |
| ribosome biogenesis gtpase der | EJI01_14825 | Not Available | Positive | 3072533 - 3073879 | 49464.4 |
| rna chaperone hfq | EJI01_14830 | Not Available | Positive | 3074085 - 3074330 | 9003.84 |
| gtpase hflx | EJI01_14835 | Not Available | Positive | 3074384 - 3075565 | 43817.3 |
| ftsh protease activity modulator hflk | EJI01_14840 | Not Available | Positive | 3075641 - 3076978 | 48215.9 |
| protease modulator hflc | EJI01_14845 | Not Available | Positive | 3077071 - 3077976 | 33896.6 |
| duf2065 domain-containing protein | EJI01_14850 | Not Available | Positive | 3078065 - 3078253 | 6954.76 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
