Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. MHTC-1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
968631 bp
Thymine Count
969319 bp
Guanine Count
1978850 bp
Cytosine Count
1966842 bp
Genome Length
5892341 bp
Protein-coding Genes
5482 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf465 domain-containing protein | EJI01_14755 | Not Available | Positive | 3057943 - 3058146 | 7985.77 |
| atp-dependent dna helicase | EJI01_14760 | Not Available | Positive | 3058146 - 3060146 | 72626.1 |
| outer membrane protein assembly factor bamd | EJI01_14765 | Not Available | Negative | 3060184 - 3060993 | 30536.2 |
| rlua family pseudouridine synthase | EJI01_14770 | Not Available | Positive | 3061056 - 3062033 | 35259.5 |
| smc-scp complex subunit scpb | EJI01_14775 | Not Available | Positive | 3062162 - 3062926 | 27859.6 |
| rrna pseudouridine synthase | EJI01_14780 | Not Available | Positive | 3062923 - 3064554 | 58842.6 |
| nucleoside-diphosphate kinase | EJI01_14785 | Not Available | Positive | 3064705 - 3065124 | 15101.2 |
| 23s rrna (adenine(2503)-c(2))-methyltransferase rlmn | EJI01_14790 | Not Available | Positive | 3065144 - 3066292 | 42128.6 |
| type iv pilus biogenesis/stability protein pilw | EJI01_14795 | Not Available | Positive | 3066297 - 3067130 | 30746.3 |
| helix-turn-helix domain-containing protein | EJI01_14800 | Not Available | Positive | 3067123 - 3068064 | 31408.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
