Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. MHTC-1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
968631 bp
Thymine Count
969319 bp
Guanine Count
1978850 bp
Cytosine Count
1966842 bp
Genome Length
5892341 bp
Protein-coding Genes
5482 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | EJI01_01430 | Not Available | Positive | 304295 - 304624 | 12220.1 |
| ld-carboxypeptidase | EJI01_01435 | Not Available | Negative | 304656 - 305588 | 33710.6 |
| trna adenosine(34) deaminase tada | EJI01_01440 | Not Available | Negative | 305585 - 306661 | 38315.8 |
| hypothetical protein | EJI01_01445 | Not Available | Negative | 306651 - 306845 | 6844.44 |
| fmn-binding negative transcriptional regulator | EJI01_01450 | Not Available | Negative | 306842 - 307483 | 24310.1 |
| aliphatic amidase | EJI01_01455 | Not Available | Negative | 307526 - 308569 | 38535.1 |
| beta-glucosidase | EJI01_01460 | Not Available | Positive | 308714 - 310987 | 81228.2 |
| zinc ribbon domain-containing protein | EJI01_01465 | Not Available | Negative | 310994 - 311335 | 12156.4 |
| acetamidase/formamidase family protein | EJI01_01470 | Not Available | Negative | 311346 - 312578 | 44654.2 |
| urea abc transporter atp-binding subunit urte | EJI01_01475 | Not Available | Negative | 312603 - 313292 | 25367.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
