Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. MHTC-1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
968631 bp
Thymine Count
969319 bp
Guanine Count
1978850 bp
Cytosine Count
1966842 bp
Genome Length
5892341 bp
Protein-coding Genes
5482 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| coa-acylating methylmalonate-semialdehyde dehydrogenase | EJI01_14705 | Not Available | Positive | 3043163 - 3044689 | 54742.0 |
| 3-deoxy-7-phosphoheptulonate synthase | EJI01_14710 | Not Available | Negative | 3044696 - 3045811 | 40161.2 |
| nad-dependent isocitrate dehydrogenase | EJI01_14715 | Not Available | Positive | 3045924 - 3046955 | 36260.0 |
| propionate--coa ligase | EJI01_14720 | Not Available | Positive | 3047122 - 3049137 | 73074.5 |
| 2-oxoglutarate dehydrogenase e1 component | EJI01_14725 | Not Available | Positive | 3049304 - 3052189 | 106711.0 |
| 2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase | EJI01_14730 | Not Available | Positive | 3052241 - 3053509 | 43861.1 |
| dihydrolipoyl dehydrogenase | EJI01_14735 | Not Available | Positive | 3053687 - 3055117 | 50391.6 |
| cell division protein zape | EJI01_14740 | Not Available | Positive | 3055271 - 3056368 | 41973.5 |
| hypothetical protein | EJI01_14745 | Not Available | Positive | 3056365 - 3057015 | 24778.8 |
| serine/threonine-protein phosphatase | EJI01_14750 | Not Available | Negative | 3057038 - 3057853 | 29453.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
