Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. MHTC-1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
968631 bp
Thymine Count
969319 bp
Guanine Count
1978850 bp
Cytosine Count
1966842 bp
Genome Length
5892341 bp
Protein-coding Genes
5482 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-val | Not Available | Not Available | Positive | 3021025 - 3021099 | Not Available |
| stereocilin | EJI01_14610 | Not Available | Positive | 3021209 - 3021355 | 5028.71 |
| nad(p)/fad-dependent oxidoreductase | EJI01_14615 | Not Available | Positive | 3021390 - 3022487 | 37811.4 |
| duf883 family protein | EJI01_14620 | Not Available | Positive | 3022581 - 3022889 | 10655.8 |
| phage holin family protein | EJI01_14625 | Not Available | Positive | 3022935 - 3023624 | 25414.2 |
| quinone-dependent dihydroorotate dehydrogenase | EJI01_14630 | Not Available | Negative | 3023638 - 3024705 | 37897.7 |
| ribose-5-phosphate isomerase rpia | EJI01_14635 | Not Available | Positive | 3024746 - 3025447 | 24504.5 |
| glutaredoxin family protein | EJI01_14640 | Not Available | Negative | 3025545 - 3026174 | 21625.6 |
| m3 family peptidase | EJI01_14645 | Not Available | Negative | 3026233 - 3028290 | 76381.2 |
| bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase fold | EJI01_14650 | Not Available | Negative | 3028296 - 3029147 | 30028.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
