Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. MHTC-1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
968631 bp
Thymine Count
969319 bp
Guanine Count
1978850 bp
Cytosine Count
1966842 bp
Genome Length
5892341 bp
Protein-coding Genes
5482 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aspartate/tyrosine/aromatic aminotransferase | EJI01_14555 | Not Available | Negative | 3011005 - 3012201 | 42817.5 |
| excinuclease abc subunit uvrb | EJI01_14560 | Not Available | Positive | 3012311 - 3014443 | 80280.0 |
| fe-s cluster assembly transcriptional regulator iscr | EJI01_14565 | Not Available | Positive | 3014662 - 3015198 | 19292.4 |
| iscs subfamily cysteine desulfurase | EJI01_14570 | Not Available | Positive | 3015277 - 3016497 | 44913.9 |
| fe-s cluster assembly scaffold iscu | EJI01_14575 | Not Available | Positive | 3016518 - 3016931 | 14363.1 |
| iron-sulfur cluster assembly protein isca | EJI01_14580 | Not Available | Positive | 3016933 - 3017256 | 11767.0 |
| fe-s protein assembly co-chaperone hscb | EJI01_14585 | Not Available | Positive | 3017404 - 3017922 | 19655.9 |
| fe-s protein assembly chaperone hsca | EJI01_14590 | Not Available | Positive | 3018016 - 3019872 | 65373.9 |
| isc system 2fe-2s type ferredoxin | EJI01_14595 | Not Available | Positive | 3019881 - 3020219 | 12325.6 |
| dna polymerase iii subunit epsilon | EJI01_14600 | Not Available | Positive | 3020219 - 3020938 | 26541.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
