Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. MHTC-1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
968631 bp
Thymine Count
969319 bp
Guanine Count
1978850 bp
Cytosine Count
1966842 bp
Genome Length
5892341 bp
Protein-coding Genes
5482 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trna dihydrouridine(20/20a) synthase dusa | EJI01_14505 | Not Available | Positive | 2998598 - 2999587 | 37514.1 |
| gntr family transcriptional regulator | EJI01_14510 | Not Available | Negative | 2999612 - 3000259 | 24125.2 |
| methylmalonyl-coa mutase | EJI01_14515 | Not Available | Positive | 3000386 - 3002545 | 77997.0 |
| methylmalonyl co-a mutase-associated gtpase meab | EJI01_14520 | Not Available | Positive | 3002548 - 3003636 | 38372.2 |
| acyl-coa carboxylase subunit beta | EJI01_14525 | Not Available | Positive | 3003633 - 3005165 | 56084.7 |
| acetyl/propionyl/methylcrotonyl-coa carboxylase subunit alpha | EJI01_14530 | Not Available | Positive | 3005298 - 3007355 | 74312.9 |
| biotin synthase biob | EJI01_14535 | Not Available | Positive | 3007355 - 3008383 | 36506.9 |
| voc family protein | EJI01_14540 | Not Available | Positive | 3008380 - 3008847 | 16706.3 |
| rnfabcdge type electron transport complex subunit b | EJI01_14545 | Not Available | Negative | 3008886 - 3009506 | 21849.2 |
| polyhydroxyalkanoate depolymerase | EJI01_14550 | Not Available | Negative | 3009520 - 3010908 | 52315.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
