Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. MHTC-1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
968631 bp
Thymine Count
969319 bp
Guanine Count
1978850 bp
Cytosine Count
1966842 bp
Genome Length
5892341 bp
Protein-coding Genes
5482 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf1810 domain-containing protein | EJI01_14250 | Not Available | Positive | 2945617 - 2946054 | 16337.6 |
| phospholipase d family protein | EJI01_14255 | Not Available | Positive | 2946044 - 2947666 | 59857.0 |
| m23 family peptidase | EJI01_14260 | Not Available | Negative | 2947663 - 2948178 | 18025.9 |
| abc transporter atp-binding protein | EJI01_14265 | Not Available | Negative | 2948241 - 2950034 | 64160.7 |
| hypothetical protein | EJI01_14270 | Not Available | Negative | 2950109 - 2950579 | 16728.3 |
| nudix hydrolase | EJI01_14275 | Not Available | Negative | 2950576 - 2951127 | 20999.1 |
| faa hydrolase family protein | EJI01_14280 | Not Available | Negative | 2951311 - 2952012 | 24916.1 |
| maleylacetoacetate isomerase | EJI01_14285 | Not Available | Positive | 2952097 - 2952735 | 24073.9 |
| peptidoglycan editing factor pgef | EJI01_14290 | Not Available | Positive | 2952738 - 2953577 | 29164.4 |
| hypothetical protein | EJI01_14295 | Not Available | Negative | 2953509 - 2953805 | 10401.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
