Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. MHTC-1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
968631 bp
Thymine Count
969319 bp
Guanine Count
1978850 bp
Cytosine Count
1966842 bp
Genome Length
5892341 bp
Protein-coding Genes
5482 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphoribulokinase | EJI01_14145 | Not Available | Positive | 2919659 - 2920537 | 32955.4 |
| transketolase | EJI01_14150 | Not Available | Positive | 2920548 - 2922584 | 72777.7 |
| fructose-bisphosphate aldolase class ii | EJI01_14155 | Not Available | Positive | 2922616 - 2923638 | 36815.2 |
| hypothetical protein | EJI01_14160 | Not Available | Positive | 2923923 - 2924195 | 9995.59 |
| outer membrane protein assembly factor bame | EJI01_14165 | Not Available | Negative | 2924285 - 2925118 | 30352.3 |
| calcium-binding protein | EJI01_14170 | Not Available | Negative | 2925151 - 2930328 | 163430.0 |
| diguanylate cyclase | EJI01_14175 | Not Available | Positive | 2930852 - 2933629 | 102795.0 |
| eal domain-containing protein | EJI01_14180 | Not Available | Positive | 2933506 - 2934369 | 31756.6 |
| lysr family transcriptional regulator | EJI01_14185 | Not Available | Negative | 2934402 - 2935334 | 34406.2 |
| tripartite tricarboxylate transporter substrate binding protein | EJI01_14190 | Not Available | Positive | 2935464 - 2936453 | 34648.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
