Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. MHTC-1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
968631 bp
Thymine Count
969319 bp
Guanine Count
1978850 bp
Cytosine Count
1966842 bp
Genome Length
5892341 bp
Protein-coding Genes
5482 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| multidrug abc transporter permease | EJI01_14095 | Not Available | Positive | 2909693 - 2910571 | 31890.8 |
| tripartite tricarboxylate transporter substrate binding protein | EJI01_14100 | Not Available | Positive | 2911386 - 2912381 | 35753.2 |
| lysr family transcriptional regulator | EJI01_14105 | Not Available | Negative | 2912413 - 2913387 | 35193.1 |
| form i ribulose bisphosphate carboxylase large subunit | EJI01_14110 | Not Available | Positive | 2913508 - 2914974 | 53726.2 |
| ribulose bisphosphate carboxylase small subunit | EJI01_14115 | Not Available | Positive | 2914999 - 2915418 | 15936.9 |
| cbbx protein | EJI01_14120 | Not Available | Positive | 2915445 - 2916365 | 34191.0 |
| had family hydrolase | EJI01_14125 | Not Available | Positive | 2916362 - 2917114 | 26783.0 |
| ribulose-phosphate 3-epimerase | EJI01_14130 | Not Available | Positive | 2917161 - 2917826 | 23452.5 |
| had family hydrolase | EJI01_14135 | Not Available | Positive | 2917823 - 2918530 | 24347.4 |
| class 1 fructose-bisphosphatase | EJI01_14140 | Not Available | Positive | 2918540 - 2919613 | 38991.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
