Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. MHTC-1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
968631 bp
Thymine Count
969319 bp
Guanine Count
1978850 bp
Cytosine Count
1966842 bp
Genome Length
5892341 bp
Protein-coding Genes
5482 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| chemotaxis protein cheb | EJI01_13935 | Not Available | Positive | 2883497 - 2884153 | 22285.0 |
| voc family protein | EJI01_13945 | Not Available | Positive | 2885259 - 2885687 | 15481.2 |
| response regulator transcription factor | EJI01_13950 | Not Available | Negative | 2885734 - 2886390 | 23652.7 |
| hamp domain-containing protein | EJI01_13955 | Not Available | Negative | 2886387 - 2887766 | 50058.6 |
| alpha/beta fold hydrolase | EJI01_13960 | Not Available | Negative | 2887763 - 2888803 | 37584.7 |
| pyrroloquinoline quinone precursor peptide pqqa | EJI01_13965 | Not Available | Positive | 2888927 - 2889001 | 2851.43 |
| pyrroloquinoline quinone biosynthesis protein pqqb | EJI01_13970 | Not Available | Positive | 2889077 - 2889997 | 32791.2 |
| pyrroloquinoline quinone biosynthesis protein pqqc | EJI01_13975 | Not Available | Positive | 2890017 - 2890781 | 29124.5 |
| pyrroloquinoline quinone biosynthesis peptide chaperone pqqd | EJI01_13980 | Not Available | Positive | 2890778 - 2891068 | 10671.8 |
| pyrroloquinoline quinone biosynthesis protein pqqe | EJI01_13985 | Not Available | Positive | 2891065 - 2892210 | 42794.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
