Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. MHTC-1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
968631 bp
Thymine Count
969319 bp
Guanine Count
1978850 bp
Cytosine Count
1966842 bp
Genome Length
5892341 bp
Protein-coding Genes
5482 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sigma-54-dependent fis family transcriptional regulator | EJI01_13835 | Not Available | Positive | 2863109 - 2865154 | 74700.2 |
| dihydromethanopterin reductase | EJI01_13840 | Not Available | Positive | 2865174 - 2865827 | 23480.1 |
| dihydropteroate synthase | EJI01_13845 | Not Available | Positive | 2865806 - 2867242 | 52324.6 |
| duf447 family protein | EJI01_13850 | Not Available | Positive | 2867251 - 2867832 | 21303.7 |
| hypothetical protein | EJI01_13855 | Not Available | Positive | 2867769 - 2868530 | 25771.8 |
| aspartate kinase | EJI01_13860 | Not Available | Negative | 2868549 - 2869148 | 21617.1 |
| h4mpt-linked c1 transfer pathway protein | EJI01_13865 | Not Available | Negative | 2869148 - 2870239 | 38684.9 |
| atp-grasp domain-containing protein | EJI01_13870 | Not Available | Negative | 2870220 - 2871206 | 34738.6 |
| nickel transporter | EJI01_13875 | Not Available | Positive | 2871234 - 2871962 | 25859.1 |
| formylmethanofuran dehydrogenase | EJI01_13880 | Not Available | Positive | 2872193 - 2873419 | 42485.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
