Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. MHTC-1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
968631 bp
Thymine Count
969319 bp
Guanine Count
1978850 bp
Cytosine Count
1966842 bp
Genome Length
5892341 bp
Protein-coding Genes
5482 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pdz domain-containing protein | EJI01_13785 | Not Available | Positive | 2853335 - 2854849 | 53453.4 |
| hypothetical protein | EJI01_13790 | Not Available | Positive | 2854846 - 2855466 | 23202.2 |
| beta-ribofuranosylaminobenzene 5'-phosphate synthase | EJI01_13795 | Not Available | Positive | 2855628 - 2856683 | 36052.3 |
| methylenetetrahydromethanopterin dehydrogenase | EJI01_13800 | Not Available | Positive | 2856720 - 2857637 | 31376.0 |
| atp-grasp domain-containing protein | EJI01_13805 | Not Available | Positive | 2857652 - 2858803 | 40950.1 |
| methenyltetrahydromethanopterin cyclohydrolase | EJI01_13810 | Not Available | Positive | 2858800 - 2859807 | 35354.0 |
| rimk family alpha-l-glutamate ligase | EJI01_13815 | Not Available | Positive | 2859809 - 2860765 | 34520.9 |
| triphosphoribosyl-dephospho-coa synthase | EJI01_13820 | Not Available | Positive | 2860762 - 2861703 | 32301.5 |
| formaldehyde-activating enzyme | EJI01_13825 | Not Available | Positive | 2861778 - 2862290 | 18003.6 |
| dihydroneopterin aldolase | EJI01_13830 | Not Available | Negative | 2862383 - 2862814 | 15950.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
