Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. MHTC-1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
968631 bp
Thymine Count
969319 bp
Guanine Count
1978850 bp
Cytosine Count
1966842 bp
Genome Length
5892341 bp
Protein-coding Genes
5482 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | EJI01_13735 | Not Available | Positive | 2842972 - 2843253 | 10308.2 |
| nodulation protein nfed | EJI01_13740 | Not Available | Positive | 2843247 - 2844776 | 53205.5 |
| upf0365 family protein | EJI01_13745 | Not Available | Positive | 2844810 - 2845775 | 34046.7 |
| duf296 domain-containing protein | EJI01_13750 | Not Available | Negative | 2846257 - 2846694 | 15826.9 |
| thiamine pyrophosphate-requiring protein | EJI01_13755 | Not Available | Negative | 2846812 - 2848608 | 65193.5 |
| hypothetical protein | EJI01_13760 | Not Available | Positive | 2849415 - 2849642 | 7939.64 |
| duf4142 domain-containing protein | EJI01_13765 | Not Available | Positive | 2849672 - 2850007 | 12066.7 |
| hypothetical protein | EJI01_13770 | Not Available | Positive | 2850025 - 2850498 | 17089.2 |
| glucose 1-dehydrogenase | EJI01_13775 | Not Available | Positive | 2850504 - 2851271 | 27306.0 |
| alpha,alpha-trehalase tref | EJI01_13780 | Not Available | Positive | 2851268 - 2852950 | 61482.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
