Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. MHTC-1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
968631 bp
Thymine Count
969319 bp
Guanine Count
1978850 bp
Cytosine Count
1966842 bp
Genome Length
5892341 bp
Protein-coding Genes
5482 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| taud/tfda family dioxygenase | EJI01_13680 | Not Available | Positive | 2822513 - 2823598 | 40542.3 |
| amino acid adenylation domain-containing protein | EJI01_13685 | Not Available | Positive | 2823595 - 2826744 | 113514.0 |
| pepsy domain-containing protein | EJI01_13695 | Not Available | Negative | 2830798 - 2832120 | 49948.9 |
| tonb-dependent siderophore receptor | EJI01_13700 | Not Available | Negative | 2832066 - 2834474 | 88161.2 |
| iron dicitrate transport regulator fecr | EJI01_13705 | Not Available | Negative | 2834634 - 2835650 | 36457.4 |
| rna polymerase sigma factor | EJI01_13710 | Not Available | Negative | 2835663 - 2836265 | 22807.4 |
| aspartate aminotransferase family protein | EJI01_13715 | Not Available | Negative | 2836393 - 2837820 | 51135.0 |
| tonb-dependent receptor | EJI01_13720 | Not Available | Positive | 2838315 - 2840306 | 72552.7 |
| cyclic peptide export abc transporter | EJI01_13725 | Not Available | Positive | 2840397 - 2842133 | 64172.9 |
| hypothetical protein | EJI01_13730 | Not Available | Positive | 2842178 - 2842417 | 8654.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
