Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. MHTC-1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
968631 bp
Thymine Count
969319 bp
Guanine Count
1978850 bp
Cytosine Count
1966842 bp
Genome Length
5892341 bp
Protein-coding Genes
5482 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| smp-30/gluconolactonase/lre family protein | EJI01_13530 | Not Available | Positive | 2783476 - 2784387 | 33198.9 |
| arac family transcriptional regulator | EJI01_13535 | Not Available | Negative | 2784397 - 2785365 | 35101.5 |
| nad-dependent epimerase/dehydratase family protein | EJI01_13540 | Not Available | Positive | 2785509 - 2786414 | 31656.7 |
| hypothetical protein | EJI01_13545 | Not Available | Negative | 2786434 - 2786694 | 9569.48 |
| 1,4-alpha-glucan branching protein glgb | EJI01_13550 | Not Available | Positive | 2786876 - 2788777 | 71801.4 |
| alpha-1,4-glucan--maltose-1-phosphate maltosyltransferase | EJI01_13555 | Not Available | Positive | 2788909 - 2790963 | 77542.6 |
| maltose alpha-d-glucosyltransferase | EJI01_13560 | Not Available | Positive | 2790976 - 2794317 | 126189.0 |
| hypothetical protein | EJI01_13565 | Not Available | Positive | 2794341 - 2795048 | 25864.3 |
| glycogen debranching enzyme glgx | EJI01_13570 | Not Available | Positive | 2795045 - 2797216 | 81928.2 |
| malto-oligosyltrehalose trehalohydrolase | EJI01_13575 | Not Available | Positive | 2797213 - 2799057 | 67450.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
