Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. MHTC-1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
968631 bp
Thymine Count
969319 bp
Guanine Count
1978850 bp
Cytosine Count
1966842 bp
Genome Length
5892341 bp
Protein-coding Genes
5482 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| general secretion pathway protein gspl | EJI01_13380 | Not Available | Positive | 2746032 - 2747240 | 42260.0 |
| type ii secretion system protein m | EJI01_13385 | Not Available | Positive | 2747237 - 2747800 | 20117.1 |
| type ii secretion system protein n | EJI01_13390 | Not Available | Positive | 2747815 - 2748612 | 27898.5 |
| type ii secretion system protein gspd | EJI01_13395 | Not Available | Positive | 2748615 - 2750933 | 80714.2 |
| type ii secretion system protein gspe | EJI01_13400 | Not Available | Positive | 2750944 - 2752365 | 51266.8 |
| hypothetical protein | EJI01_13405 | Not Available | Negative | 2752453 - 2753025 | 20745.8 |
| type ii secretion system protein gspf | EJI01_13410 | Not Available | Positive | 2753121 - 2754353 | 43779.2 |
| 5'-nucleotidase | EJI01_13415 | Not Available | Positive | 2754361 - 2755260 | 32884.3 |
| abc transporter atp-binding protein/permease | EJI01_13420 | Not Available | Positive | 2755358 - 2757124 | 65180.3 |
| 7-cyano-7-deazaguanine synthase quec | EJI01_13425 | Not Available | Negative | 2757103 - 2757804 | 25989.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
