Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. MHTC-1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
968631 bp
Thymine Count
969319 bp
Guanine Count
1978850 bp
Cytosine Count
1966842 bp
Genome Length
5892341 bp
Protein-coding Genes
5482 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| porin | EJI01_13330 | Not Available | Negative | 2737825 - 2739069 | 43553.8 |
| 2-polyprenyl-3-methyl-6-methoxy-1,4- benzoquinone monooxygenase | EJI01_13335 | Not Available | Positive | 2739353 - 2739982 | 22379.7 |
| osmc family protein | EJI01_13340 | Not Available | Negative | 2740003 - 2740452 | 15739.0 |
| threonine ammonia-lyase, biosynthetic | EJI01_13345 | Not Available | Positive | 2740704 - 2742257 | 56187.6 |
| hypothetical protein | EJI01_13350 | Not Available | Negative | 2742273 - 2742791 | 17039.5 |
| type ii secretion system protein gspg | EJI01_13355 | Not Available | Positive | 2742874 - 2743314 | 15989.4 |
| type ii secretion system protein gsph | EJI01_13360 | Not Available | Positive | 2743289 - 2743792 | 17161.8 |
| type ii secretion system protein gspi | EJI01_13365 | Not Available | Positive | 2743789 - 2744154 | 12905.9 |
| prepilin-type n-terminal cleavage/methylation domain-containing protein | EJI01_13370 | Not Available | Positive | 2744154 - 2744819 | 24160.0 |
| general secretion pathway protein gspk | EJI01_13375 | Not Available | Positive | 2744816 - 2745898 | 37854.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
