Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. MHTC-1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
968631 bp
Thymine Count
969319 bp
Guanine Count
1978850 bp
Cytosine Count
1966842 bp
Genome Length
5892341 bp
Protein-coding Genes
5482 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alcohol dehydrogenase | EJI01_13075 | Not Available | Negative | 2687528 - 2688637 | 39532.7 |
| bifunctional 3-(3-hydroxy-phenyl)propionate/3-hydroxycinnamic acid hydroxylase | EJI01_13080 | Not Available | Positive | 2688749 - 2690389 | 59631.4 |
| sdr family oxidoreductase | EJI01_13085 | Not Available | Negative | 2690429 - 2691184 | 26271.4 |
| tripartite tricarboxylate transporter substrate binding protein | EJI01_13090 | Not Available | Negative | 2691355 - 2692329 | 34132.8 |
| acyl-coa dehydrogenase | EJI01_13095 | Not Available | Negative | 2692361 - 2693515 | 41865.6 |
| thiolase | EJI01_13100 | Not Available | Negative | 2693526 - 2694704 | 41244.7 |
| dna-binding protein | EJI01_13105 | Not Available | Negative | 2694701 - 2695096 | 14429.3 |
| sdr family oxidoreductase | EJI01_13110 | Not Available | Negative | 2695105 - 2696010 | 32008.1 |
| enoyl-coa hydratase/isomerase family protein | EJI01_13115 | Not Available | Negative | 2696025 - 2696825 | 28170.9 |
| long-chain fatty acid--coa ligase | EJI01_13120 | Not Available | Negative | 2697082 - 2698833 | 63890.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
