Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. MHTC-1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
968631 bp
Thymine Count
969319 bp
Guanine Count
1978850 bp
Cytosine Count
1966842 bp
Genome Length
5892341 bp
Protein-coding Genes
5482 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tripartite tricarboxylate transporter substrate binding protein | EJI01_12820 | Not Available | Positive | 2634264 - 2635229 | 33608.9 |
| hypothetical protein | EJI01_12825 | Not Available | Positive | 2635234 - 2635980 | 26305.3 |
| gntr family transcriptional regulator | EJI01_12830 | Not Available | Positive | 2636011 - 2636697 | 25276.7 |
| class ii aldolase/adducin family protein | EJI01_12835 | Not Available | Negative | 2636739 - 2637536 | 29095.1 |
| tripartite tricarboxylate transporter substrate binding protein | EJI01_12840 | Not Available | Negative | 2637533 - 2638570 | 36076.8 |
| tripartite tricarboxylate transporter substrate binding protein | EJI01_12845 | Not Available | Negative | 2638602 - 2639606 | 35100.2 |
| amidase | EJI01_12850 | Not Available | Negative | 2639606 - 2641042 | 51506.8 |
| lysr family transcriptional regulator | EJI01_12855 | Not Available | Positive | 2641161 - 2642042 | 31611.2 |
| had family hydrolase | EJI01_12860 | Not Available | Positive | 2642212 - 2642910 | 26000.6 |
| amidohydrolase | EJI01_12865 | Not Available | Positive | 2642907 - 2644139 | 43217.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
